Histopathology data for Sparcl1

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #2 Ovary [MA:0000384]
HOM F #1 Salivary gland [MA:0000346]
HOM F #2 Knee joint [MA:0000471]
HOM F #1 Knee joint [MA:0000471]
HOM M #3 Seminal vesicle [MA:0000410]
HOM M #4 Brown adipose tissue [MA:0000057]
HOM F #2 Ear [MA:0000236]
HOM M #3 Small intestine [MA:0000337]
HOM F #2 Thymus [MA:0000142]
HOM F #1 Bone [MA:0001459]
HOM M #4 Spinal cord [MA:0000216]
HOM M #4 Tibia [MA:0001361]
HOM M #4 Thymus [MA:0000142]
HOM F #2 Skeletal muscle [MA:0003148]
HOM M #3 Tibia [MA:0001361]
HOM F #2 Bone [MA:0001459]
HOM M #3 Ear [MA:0000236]
HOM F #2 Sternum [MA:0001331]
HOM M #3 Thymus [MA:0000142]
HOM F #2 Mammary gland [MA:0000145]
HOM M #3 Tooth [MA:0000348]
HOM M #4 Liver [MA:0000358]
HOM F #2 Tibia [MA:0001361]
HOM F #2 Uterus [MA:0000389]
HOM F #2 Spleen [MA:0000141]
HOM F #1 Gall bladder [MA:0000356]
HOM F #1 Thyroid
HOM M #4 Small intestine [MA:0000337]
HOM M #3 Brain [MA:0000168]
HOM F #2 Adrenal gland [MA:0000116]
HOM M #3 Skeletal muscle [MA:0003148]
HOM F #1 Trigeminal V ganglion [MA:0001080]
HOM M #3 Skin [MA:0000151]
HOM M #3 Pancreas [MA:0000120]
HOM M #4 Adrenal gland [MA:0000116]
HOM F #2 Thyroid
HOM M #3 Esophagus [MA:0000352]
HOM F #1 Uterus [MA:0000389]
HOM F #1 Small intestine [MA:0000337]
HOM F #2 Skin [MA:0000151] 1 0 Haired skin, nasal: Mild, focal, neutrophilic, dermatitis
HOM F #1 Brain [MA:0000168]
HOM M #3 Sternum [MA:0001331]
HOM F #1 Esophagus [MA:0000352]
HOM F #1 Tibia [MA:0001361]
HOM M #4 Large intestine [MA:0000333]
HOM F #2 Small intestine [MA:0000337]
HOM M #4 Salivary gland [MA:0000346]
HOM M #3 Heart [MA:0000072]
HOM F #1 Bone marrow [MA:0000134]
HOM M #4 Urinary bladder [MA:0000380]
HOM M #4 Seminal vesicle [MA:0000410]
HOM M #3 Adrenal gland [MA:0000116]
HOM M #4 Bone [MA:0001459]
HOM F #2 Liver [MA:0000358] 1 0 Liver: Mild, focal, neutrophilic hepatitis
HOM F #2 Pancreas [MA:0000120]
HOM M #4 Testis [MA:0000411]
HOM M #3 Trachea [MA:0000441]
HOM M #3 Knee joint [MA:0000471]
HOM M #3 Kidney [MA:0000368]
HOM F #1 Tongue [MA:0000347]
HOM F #1 Sciatic nerve [MA:0001172]
HOM F #2 Brain [MA:0000168]
HOM F #1 Brown adipose tissue [MA:0000057]
HOM M #3 Lymph node [MA:0000139]
HOM F #1 Lymph node [MA:0000139] 1 0 Lymph node, mesenteric: Mild, follicular lymphoid hyperplasia
HOM M #3 Prostate gland [MA:0000404]
HOM M #3 Thyroid
HOM F #2 Kidney [MA:0000368]
HOM M #4 Ear [MA:0000236]
HOM M #3 Trigeminal V ganglion [MA:0001080]
HOM M #3 Bone [MA:0001459]
HOM F #2 Tongue [MA:0000347]
HOM F #2 Lymph node [MA:0000139]
HOM M #3 Nasal cavity [MA:0000284]
HOM F #2 Trachea [MA:0000441]
HOM F #1 Urinary bladder [MA:0000380]
HOM F #2 Lung [MA:0000415]
HOM F #1 Adrenal gland [MA:0000116]
HOM F #1 Ovary [MA:0000384]
HOM F #2 Spinal cord [MA:0000216]
HOM M #4 Sciatic nerve [MA:0001172]
HOM M #4 Esophagus [MA:0000352]
HOM M #4 Eye [MA:0000261]
HOM M #4 Bone marrow [MA:0000134]
HOM M #3 Lung [MA:0000415]
HOM F #2 Nasal cavity [MA:0000284]
HOM M #3 Tongue [MA:0000347]
HOM F #1 Sternum [MA:0001331]
HOM M #3 Sciatic nerve [MA:0001172]
HOM F #1 Femur [MA:0001359]
HOM F #1 Kidney [MA:0000368]
HOM M #3 Large intestine [MA:0000333]
HOM M #3 Spinal cord [MA:0000216]
HOM M #4 Tongue [MA:0000347]
HOM F #2 Urinary bladder [MA:0000380]
HOM M #3 Gall bladder [MA:0000356]
HOM M #4 Prostate gland [MA:0000404]
HOM F #1 Large intestine [MA:0000333]
HOM F #2 Large intestine [MA:0000333]
HOM M #4 Heart [MA:0000072]
HOM M #4 Brain [MA:0000168]
HOM M #4 Stomach [MA:0000353]
HOM M #4 Trachea [MA:0000441]
HOM M #4 Lymph node [MA:0000139]
HOM F #1 Spleen [MA:0000141]
HOM F #1 Ear [MA:0000236]
HOM F #2 Salivary gland [MA:0000346]
HOM F #2 Trigeminal V ganglion [MA:0001080]
HOM M #3 Testis [MA:0000411]
HOM F #2 Esophagus [MA:0000352]
HOM M #3 Eye [MA:0000261] 2 0 Eye, unilateral: Moderate, multifocal retinal dysplasia
HOM F #2 Heart [MA:0000072]
HOM M #4 Lung [MA:0000415]
HOM M #4 Nasal cavity [MA:0000284]
HOM F #1 Skin [MA:0000151]
HOM M #3 Urinary bladder [MA:0000380]
HOM M #4 Sternum [MA:0001331]
HOM F #2 Femur [MA:0001359]
HOM F #1 Thymus [MA:0000142]
HOM M #3 Bone marrow [MA:0000134]
HOM F #2 Gall bladder [MA:0000356]
HOM F #1 Skeletal muscle [MA:0003148]
HOM M #3 Epididymis [MA:0000397]
HOM M #4 Kidney [MA:0000368]
HOM F #1 Heart [MA:0000072]
HOM F #2 Sciatic nerve [MA:0001172]
HOM F #2 Tooth [MA:0000348]
HOM M #4 Knee joint [MA:0000471]
HOM M #4 Trigeminal V ganglion [MA:0001080]
HOM F #1 Liver [MA:0000358] 1 0 Liver: Focal microgranuloma Liver: Minimal, focal, mixed cellular infiltrate
HOM M #3 Liver [MA:0000358]
HOM F #1 Mammary gland [MA:0000145]
HOM M #3 Brown adipose tissue [MA:0000057]
HOM M #3 Spleen [MA:0000141]
HOM M #4 Tooth [MA:0000348]
HOM M #3 Stomach [MA:0000353]
HOM F #1 Lung [MA:0000415]
HOM F #1 Pancreas [MA:0000120]
HOM M #4 Spleen [MA:0000141]
HOM F #1 Stomach [MA:0000353]
HOM M #3 Femur [MA:0001359]
HOM F #1 Spinal cord [MA:0000216]
HOM F #2 Eye [MA:0000261]
HOM F #1 Eye [MA:0000261] 1 0 Eye, unilateral: Mild, focal, retinal dysplasia
HOM F #2 Bone marrow [MA:0000134]
HOM M #4 Gall bladder [MA:0000356]
HOM F #1 Nasal cavity [MA:0000284]
HOM M #4 Thyroid
HOM M #4 Femur [MA:0001359]
HOM M #4 Pancreas [MA:0000120]
HOM F #1 Trachea [MA:0000441]
HOM M #3 Salivary gland [MA:0000346]
HOM F #2 Brown adipose tissue [MA:0000057]
HOM M #4 Epididymis [MA:0000397]
HOM M #4 Skeletal muscle [MA:0003148]
HOM M #4 Skin [MA:0000151]
HOM F #1 Tooth [MA:0000348]
HOM F #2 Stomach [MA:0000353]

Associated histopathology images

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