Histopathology data for Or1e32

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM M #6 Sciatic nerve [MA:0001172]
HOM M #6 Thyroid
HOM F #4 Skin [MA:0000151]
HOM M #1 Spleen [MA:0000141]
HOM M #3 Bone [MA:0001459]
HOM F #2 Nasal cavity [MA:0000284]
HOM F #8 Trigeminal V ganglion [MA:0001080]
HOM M #5 Urinary bladder [MA:0000380]
HOM M #5 Spinal cord [MA:0000216]
HOM F #4 Brain [MA:0000168]
HOM F #8 Heart [MA:0000072]
HOM F #2 Large intestine [MA:0000333]
HOM F #7 Sternum [MA:0001331]
HOM F #8 Stomach [MA:0000353]
HOM F #2 Spinal cord [MA:0000216]
HOM F #4 Uterus [MA:0000389]
HOM F #7 Ovary [MA:0000384]
HOM M #1 Kidney [MA:0000368]
HOM F #4 Liver [MA:0000358]
HOM F #2 Lung [MA:0000415]
HOM F #7 Thymus [MA:0000142]
HOM F #2 Tongue [MA:0000347]
HOM M #1 Trachea [MA:0000441]
HOM M #1 Adrenal gland [MA:0000116]
HOM F #8 Esophagus [MA:0000352]
HOM F #4 Esophagus [MA:0000352]
HOM M #6 Eye [MA:0000261]
HOM F #4 Tibia [MA:0001361]
HOM M #5 Nasal cavity [MA:0000284]
HOM M #6 Kidney [MA:0000368]
HOM M #1 Sciatic nerve [MA:0001172]
HOM M #6 Trachea [MA:0000441]
HOM F #7 Knee joint [MA:0000471]
HOM M #5 Femur [MA:0001359]
HOM M #3 Trachea [MA:0000441]
HOM F #4 Heart [MA:0000072]
HOM M #3 Brown adipose tissue [MA:0000057]
HOM F #7 Lymph node [MA:0000139] 1 0 chronic reactive lymphadenopathy
HOM M #3 Prostate gland [MA:0000404]
HOM M #5 Salivary gland [MA:0000346]
HOM M #1 Thyroid
HOM M #6 Bone marrow [MA:0000134]
HOM M #3 Pancreas [MA:0000120]
HOM M #3 Spleen [MA:0000141]
HOM M #3 Kidney [MA:0000368]
HOM M #5 Lung [MA:0000415]
HOM F #2 Pancreas [MA:0000120]
HOM M #5 Small intestine [MA:0000337]
HOM F #7 Large intestine [MA:0000333]
HOM F #4 Thymus [MA:0000142]
HOM F #2 Salivary gland [MA:0000346]
HOM M #6 Heart [MA:0000072]
HOM M #1 Bone [MA:0001459]
HOM F #4 Knee joint [MA:0000471]
HOM F #7 Lung [MA:0000415]
HOM F #4 Ear [MA:0000236]
HOM M #3 Salivary gland [MA:0000346]
HOM M #3 Urinary bladder [MA:0000380]
HOM F #4 Ovary [MA:0000384]
HOM M #1 Prostate gland [MA:0000404]
HOM M #5 Tongue [MA:0000347]
HOM F #7 Brain [MA:0000168]
HOM F #7 Tongue [MA:0000347]
HOM F #4 Lymph node [MA:0000139]
HOM F #8 Adrenal gland [MA:0000116]
HOM M #5 Large intestine [MA:0000333]
HOM F #7 Skin [MA:0000151]
HOM F #8 Sciatic nerve [MA:0001172]
HOM M #6 Bone [MA:0001459]
HOM M #3 Skeletal muscle [MA:0003148]
HOM M #6 Prostate gland [MA:0000404]
HOM F #8 Tibia [MA:0001361]
HOM F #2 Femur [MA:0001359]
HOM F #4 Mammary gland [MA:0000145]
HOM F #7 Ear [MA:0000236]
HOM M #1 Small intestine [MA:0000337]
HOM F #8 Bone marrow [MA:0000134]
HOM F #2 Small intestine [MA:0000337]
HOM M #3 Small intestine [MA:0000337]
HOM M #5 Pancreas [MA:0000120]
HOM M #3 Femur [MA:0001359]
HOM F #2 Urinary bladder [MA:0000380]
HOM M #6 Adrenal gland [MA:0000116]
HOM F #7 Liver [MA:0000358]
HOM F #2 Ovary [MA:0000384]
HOM M #1 Liver [MA:0000358] 2 0 macrovesicular lipidosis
HOM M #6 Esophagus [MA:0000352]
HOM F #7 Mammary gland [MA:0000145]
HOM M #1 Skeletal muscle [MA:0003148]
HOM F #8 Eye [MA:0000261]
HOM M #6 Trigeminal V ganglion [MA:0001080]
HOM F #7 Uterus [MA:0000389] 2 0 uterine cystic endometrial hyperplasia
HOM M #5 Skeletal muscle [MA:0003148]
HOM M #1 Brown adipose tissue [MA:0000057]
HOM F #4 Gall bladder [MA:0000356]
HOM F #2 Bone [MA:0001459]
HOM M #1 Salivary gland [MA:0000346]
HOM F #4 Thyroid
HOM F #7 Urinary bladder [MA:0000380]
HOM F #2 Ear [MA:0000236]
HOM F #4 Adrenal gland [MA:0000116]
HOM F #7 Heart [MA:0000072]
HOM F #7 Esophagus [MA:0000352]
HOM F #7 Trigeminal V ganglion [MA:0001080]
HOM F #4 Sciatic nerve [MA:0001172]
HOM F #4 Spleen [MA:0000141]
HOM F #2 Knee joint [MA:0000471]
HOM M #1 Esophagus [MA:0000352]
HOM M #3 Nasal cavity [MA:0000284]
HOM F #8 Trachea [MA:0000441]
HOM F #8 Knee joint [MA:0000471]
HOM M #6 Small intestine [MA:0000337]
HOM M #5 Prostate gland [MA:0000404]
HOM F #8 Lymph node [MA:0000139]
HOM F #2 Lymph node [MA:0000139]
HOM F #4 Large intestine [MA:0000333]
HOM M #3 Stomach [MA:0000353]
HOM F #7 Brown adipose tissue [MA:0000057]
HOM M #6 Brown adipose tissue [MA:0000057]
HOM M #3 Epididymis [MA:0000397]
HOM M #3 Lung [MA:0000415]
HOM M #6 Pancreas [MA:0000120]
HOM F #8 Bone [MA:0001459]
HOM M #6 Seminal vesicle [MA:0000410]
HOM M #5 Sternum [MA:0001331]
HOM M #3 Spinal cord [MA:0000216]
HOM M #6 Thymus [MA:0000142]
HOM F #8 Femur [MA:0001359]
HOM F #8 Thyroid
HOM F #2 Brown adipose tissue [MA:0000057]
HOM M #3 Bone marrow [MA:0000134]
HOM M #3 Sternum [MA:0001331]
HOM F #2 Esophagus [MA:0000352]
HOM M #3 Tooth [MA:0000348]
HOM M #6 Ear [MA:0000236] 2 0 unilateral otitis media
HOM M #5 Tibia [MA:0001361]
HOM F #8 Tongue [MA:0000347]
HOM M #1 Trigeminal V ganglion [MA:0001080]
HOM M #1 Heart [MA:0000072]
HOM F #7 Eye [MA:0000261]
HOM F #2 Adrenal gland [MA:0000116]
HOM F #8 Urinary bladder [MA:0000380]
HOM M #6 Spleen [MA:0000141]
HOM F #7 Gall bladder [MA:0000356]
HOM F #7 Adrenal gland [MA:0000116]
HOM M #6 Large intestine [MA:0000333]
HOM F #4 Eye [MA:0000261]
HOM F #8 Liver [MA:0000358]
HOM F #8 Brain [MA:0000168]
HOM M #3 Tibia [MA:0001361]
HOM F #2 Gall bladder [MA:0000356]
HOM M #5 Bone marrow [MA:0000134]
HOM F #8 Skeletal muscle [MA:0003148]
HOM F #2 Eye [MA:0000261]
HOM M #1 Eye [MA:0000261]
HOM F #8 Skin [MA:0000151]
HOM M #5 Epididymis [MA:0000397]
HOM M #1 Gall bladder [MA:0000356]
HOM M #5 Tooth [MA:0000348]
HOM M #1 Testis [MA:0000411]
HOM M #6 Salivary gland [MA:0000346]
HOM F #8 Spinal cord [MA:0000216]
HOM M #5 Stomach [MA:0000353]
HOM F #7 Trachea [MA:0000441]
HOM M #5 Heart [MA:0000072]
HOM F #4 Tooth [MA:0000348]
HOM F #4 Femur [MA:0001359]
HOM M #5 Trigeminal V ganglion [MA:0001080]
HOM F #7 Skeletal muscle [MA:0003148]
HOM M #6 Gall bladder [MA:0000356]
HOM M #9 Eye [MA:0000261]
HOM M #6 Testis [MA:0000411]
HOM F #4 Brown adipose tissue [MA:0000057]
HOM M #1 Sternum [MA:0001331]
HOM F #7 Bone marrow [MA:0000134]
HOM F #4 Small intestine [MA:0000337]
HOM F #2 Heart [MA:0000072]
HOM M #3 Thymus [MA:0000142]
HOM F #2 Stomach [MA:0000353]
HOM M #3 Knee joint [MA:0000471]
HOM M #1 Lymph node [MA:0000139]
HOM F #2 Trigeminal V ganglion [MA:0001080]
HOM F #7 Thyroid
HOM F #7 Bone [MA:0001459]
HOM F #2 Sciatic nerve [MA:0001172]
HOM M #3 Seminal vesicle [MA:0000410]
HOM M #6 Tongue [MA:0000347]
HOM F #8 Nasal cavity [MA:0000284]
HOM F #7 Kidney [MA:0000368]
HOM M #5 Esophagus [MA:0000352]
HOM M #6 Lung [MA:0000415]
HOM M #3 Lymph node [MA:0000139]
HOM F #2 Thyroid
HOM F #7 Sciatic nerve [MA:0001172]
HOM F #4 Salivary gland [MA:0000346]
HOM M #5 Brain [MA:0000168]
HOM M #3 Liver [MA:0000358]
HOM M #1 Ear [MA:0000236]
HOM F #2 Kidney [MA:0000368]
HOM F #8 Gall bladder [MA:0000356]
HOM F #7 Small intestine [MA:0000337]
HOM F #8 Tooth [MA:0000348]
HOM M #5 Skin [MA:0000151]
HOM M #1 Thymus [MA:0000142]
HOM M #6 Lymph node [MA:0000139] 2 0 generalized chronic reactive lymphadenopathy
HOM F #2 Spleen [MA:0000141]
HOM M #6 Spinal cord [MA:0000216]
HOM M #5 Seminal vesicle [MA:0000410]
HOM F #4 Spinal cord [MA:0000216] 1 0 epithelial inclusion cyst
HOM M #6 Knee joint [MA:0000471]
HOM M #1 Knee joint [MA:0000471]
HOM M #5 Thyroid
HOM F #4 Bone [MA:0001459]
HOM M #1 Large intestine [MA:0000333]
HOM F #2 Trachea [MA:0000441]
HOM M #1 Spinal cord [MA:0000216]
HOM M #1 Seminal vesicle [MA:0000410]
HOM F #8 Brown adipose tissue [MA:0000057]
HOM F #2 Brain [MA:0000168]
HOM M #1 Lung [MA:0000415]
HOM F #4 Urinary bladder [MA:0000380]
HOM M #1 Tongue [MA:0000347]
HOM M #5 Kidney [MA:0000368]
HOM M #3 Skin [MA:0000151]
HOM F #2 Skeletal muscle [MA:0003148]
HOM F #7 Salivary gland [MA:0000346]
HOM M #5 Liver [MA:0000358]
HOM F #7 Femur [MA:0001359]
HOM F #2 Uterus [MA:0000389]
HOM M #6 Tibia [MA:0001361]
HOM M #1 Urinary bladder [MA:0000380]
HOM M #3 Brain [MA:0000168]
HOM F #4 Pancreas [MA:0000120]
HOM F #4 Kidney [MA:0000368]
HOM F #4 Skeletal muscle [MA:0003148]
HOM F #4 Trachea [MA:0000441]
HOM M #3 Large intestine [MA:0000333]
HOM M #1 Skin [MA:0000151]
HOM M #3 Ear [MA:0000236]
HOM F #4 Tongue [MA:0000347]
HOM F #2 Mammary gland [MA:0000145]
HOM F #4 Lung [MA:0000415]
HOM M #5 Thymus [MA:0000142]
HOM M #6 Nasal cavity [MA:0000284]
HOM F #2 Skin [MA:0000151]
HOM M #1 Pancreas [MA:0000120] 2 0 pancreatic islet cell hyperplasia
HOM M #1 Brain [MA:0000168]
HOM F #2 Liver [MA:0000358]
HOM M #6 Sternum [MA:0001331]
HOM F #7 Spleen [MA:0000141]
HOM M #5 Lymph node [MA:0000139]
HOM F #8 Thymus [MA:0000142]
HOM M #6 Femur [MA:0001359]
HOM M #6 Brain [MA:0000168]
HOM M #5 Knee joint [MA:0000471]
HOM M #1 Tooth [MA:0000348]
HOM M #5 Trachea [MA:0000441]
HOM F #7 Stomach [MA:0000353]
HOM F #2 Thymus [MA:0000142]
HOM M #6 Skin [MA:0000151]
HOM F #7 Pancreas [MA:0000120]
HOM F #2 Tibia [MA:0001361]
HOM M #1 Femur [MA:0001359]
HOM M #3 Eye [MA:0000261]
HOM F #8 Ear [MA:0000236]
HOM M #3 Sciatic nerve [MA:0001172]
HOM M #6 Liver [MA:0000358] 1 0 macrovesicular lipidosis
HOM M #5 Spleen [MA:0000141]
HOM F #7 Spinal cord [MA:0000216]
HOM M #5 Bone [MA:0001459]
HOM M #5 Ear [MA:0000236]
HOM M #3 Tongue [MA:0000347]
HOM M #3 Thyroid
HOM F #8 Sternum [MA:0001331]
HOM M #5 Adrenal gland [MA:0000116]
HOM M #6 Epididymis [MA:0000397]
HOM F #4 Nasal cavity [MA:0000284]
HOM M #6 Tooth [MA:0000348]
HOM F #4 Sternum [MA:0001331]
HOM M #1 Nasal cavity [MA:0000284]
HOM F #7 Tibia [MA:0001361]
HOM M #6 Stomach [MA:0000353]
HOM M #5 Testis [MA:0000411]
HOM F #2 Tooth [MA:0000348]
HOM F #8 Salivary gland [MA:0000346]
HOM M #5 Gall bladder [MA:0000356]
HOM M #3 Esophagus [MA:0000352]
HOM M #6 Skeletal muscle [MA:0003148]
HOM F #8 Spleen [MA:0000141]
HOM F #2 Sternum [MA:0001331]
HOM F #2 Bone marrow [MA:0000134]
HOM F #8 Uterus [MA:0000389]
HOM M #6 Urinary bladder [MA:0000380]
HOM M #1 Stomach [MA:0000353]
HOM M #5 Sciatic nerve [MA:0001172]
HOM F #7 Tooth [MA:0000348]
HOM F #8 Large intestine [MA:0000333]
HOM F #7 Nasal cavity [MA:0000284]
HOM F #8 Kidney [MA:0000368]
HOM M #3 Trigeminal V ganglion [MA:0001080]
HOM M #5 Brown adipose tissue [MA:0000057]
HOM M #1 Tibia [MA:0001361]
HOM M #1 Epididymis [MA:0000397]
HOM M #3 Testis [MA:0000411]
HOM M #3 Gall bladder [MA:0000356]
HOM F #8 Mammary gland [MA:0000145]
HOM F #8 Lung [MA:0000415]
HOM F #8 Small intestine [MA:0000337]
HOM M #1 Bone marrow [MA:0000134]
HOM M #3 Heart [MA:0000072]
HOM F #4 Stomach [MA:0000353]
HOM M #5 Eye [MA:0000261]
HOM M #3 Adrenal gland [MA:0000116]
HOM F #8 Pancreas [MA:0000120]
HOM F #8 Ovary [MA:0000384]
HOM F #4 Bone marrow [MA:0000134]

Associated histopathology images

The IMPC Newsletter

Get highlights of the most important data releases, news and events, delivered straight to your email inbox

Subscribe to newsletter