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Help & Documentation

Phenodigm API access

Disease association scores are available to download on a per gene basis. The application programming interface (API) endpoint expects to receive a mouse gene identifier. For example, for mouse gene Scarf2, the identifier is MGI:1858430. The phenodigm data for this gene can be retrieved at the following URL:

http://www.mousephenotype.org/data/phenodigm2/genescores?geneId=MGI:1858430

The URL can be adjusted with other gene identifiers. The output is a json document, which is a standard format for data exchange and can be processed by many data-science frameworks and programming languages. In particular, these frameworks can convert the data into a spreadsheet; free json-to-spreadsheet converters are also available online.

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