IMPC Data Release 17.0 Notes

IMPC

  • Release: 17.0
  • Published: 19 July 2022

Statistical Package

Genome Assembly

Summary

  • Number of phenotyped genes: 8,267
  • Number of phenotyped mutant lines: 8,916
  • Number of phenotype calls: 97,294

Data access

  • Ftp interface: ftp
  • RESTful interfaces: APIs

Highlights

Data release 17.0

Release notes:

Represents a major data release.
This release

  • Includes approximately 5 million more data points
  • Has additional validation applied to the images and GenBank files reported in the gene page ordering section.

Data Reports

Total Number of Lines and Specimens in DR 17.0

Phenotyping Center Mutant Lines Baseline Mice Mutant Mice
TCP 713 8,934 29,423
JAX 1,885 14,977 55,406
HMGU 485 5,636 9,410
CCP-IMG 244 2,593 4,539
MRC Harwell 841 7,487 20,681
MARC 233 1,858 3,588
KMPC 74 2,153 2,622
RBRC 108 2,149 2,448
ICS 239 2,619 3,882
WTSI 1,612 5,364 18,660
UC Davis 1,491 8,858 37,490
BCM 992 7,015 26,663

Experimental Data and Quality Checks

Data Type QC Passed Data Points
categorical 24,041,093
image record 786,081
time series 24,878,391
ontological 1,805,447
text 542,097
unidimensional 20,309,782

* Excluded from statistical analysis.

Distribution of Phenotype Annotations

Production Status

Overall

By Center

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More charts and status information are available from our mouse tracking services iMits and GenTaR.

Phenotype Associations

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Trends

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Previous Releases

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