IMPC Data Release 12.0 Notes

IMPC

  • Release: 12.0
  • Published: 13 September 2020

Statistical Package

  • OpenStats
  • Version: OpenStats v1.0.2

Genome Assembly

  • Mus musculus
  • Version: GRCm38

Summary

  • Number of phenotyped genes: 7,022
  • Number of phenotyped mutant lines: 7,606
  • Number of phenotype calls: 92,322

Data access

  • Ftp interface: ftp
  • RESTful interfaces: APIs

Highlights

Data release 12.0

Release notes:

Data Reports

Total Number of Lines and Specimens in DR 12.0

Phenotyping Center Mutant Lines Baseline Mice Mutant Mice
TCP 631 7,720 25,940
JAX 1,597 10,526 42,694
HMGU 361 3,878 6,677
CCP-IMG 101 1,473 1,834
MRC Harwell 711 6,964 18,141
MARC 233 1,858 3,595
KMPC 53 1,385 1,841
RBRC 103 2,132 2,080
ICS 240 2,576 3,864
WTSI 1,540 5,109 17,864
UC Davis 1,325 6,482 29,721
BCM 711 6,060 20,299

Experimental Data and Quality Checks

Data Type QC passed
categorical 19,587,640
image record 538,628
time series 16,917,206
ontological 1,142,459
text 383,858
unidimensional 14,377,881

* Excluded from statistical analysis.

Distribution of Phenotype Annotations

Production Status

Overall

By Center

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More charts and status information are available from iMits.

Phenotype Associations

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Trends

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Previous Releases

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