IMPC Release Notes

IMPC
  • Release: 9.2
  • Published: 27 September 2018
Statistical Package
  • PhenStat
  • Version: 2.7.1
Genome Assembly
  • Mus musculus
  • Version: GRCm38
Summary
  • Number of phenotyped genes: 5,614
  • Number of phenotyped mutant lines: 6,006
  • Number of phenotype calls: 57,816

Data access

Highlights

Data release 9.2

Data release 9.2 represents a major data release. Changes include:

Data Reports

Lines and Specimens

Phenotyping Center Mutant Lines Baseline Mice Mutant Mice
JAX 1,155 7,968 33,496
TCP 529 6,838 23,932
HMGU 308 3,104 5,644
KMPC 39 786 1,004
MARC 232 1,877 3,776
MRC Harwell 563 5,788 14,897
RBRC 93 1,981 1,817
ICS 214 2,243 3,430
WTSI 1,328 4,563 21,297
BCM 521 4,225 15,956
UC Davis 1,024 3,875 23,467

Experimental Data and Quality Checks

Data Type QC passed QC failed issues
categorical 13,312,831 3,734 * 17,736 *
unidimensional 10,094,468 36,902 * 283,622 *
time series 12,236,110 2,570 * 11 *
text 180,098 11,124 * 45,653 *
image record 396,400 0 0

* Excluded from statistical analysis.

Distribution of Phenotype Annotations

Status

Overall

By Center

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More charts and status information are available from iMits.

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Trends




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Previous Releases