Gene Summary

Name:
cingulin
Synonyms:
6330408J11Rik

IMPC Phenotype Summary

Significant
Not Significant
Not tested

Phenotypes

The IMPC applies a panel of phenotyping screens to characterise single-gene knockout mice by comparison to wild types. Click on the different tabs to visualise significant phenotypes identified by the IMPC, as well as all data that was measured.

Phenotype System Allele Zyg Sex Life Stage P Value
cyanosis Cgntm1b(KOMP)Wtsi HOM E18.5 0.00
abnormal forebrain morphology Cgntm1b(KOMP)Wtsi HOM E12.5 0.00
preweaning lethality, complete penetrance Cgntm1b(KOMP)Wtsi HOM   Early adult 0.00
abnormal neural tube closure Cgntm1b(KOMP)Wtsi HOM E12.5 0.00
abnormal embryo size Cgntm1b(KOMP)Wtsi HOM E18.5 0.00
hemorrhage Cgntm1b(KOMP)Wtsi HOM E12.5 0.00
abnormal tail morphology Cgntm1b(KOMP)Wtsi HOM E18.5 0.00

Download data as:  TSV  XLS

Select physiological systems to view:
Viewing: all phenotypes
Select physiological systems to view:
Viewing: all phenotypes

lacZ Expression

An assay measuring the expression of lacZ shows the tissue where the gene is expressed.

Anatomy Images Zygosity Mutant Expr
Epididymis  Section images heterozygote 50% (1 of 2)
Esophagus  Section images heterozygote 100% (2 of 2)
Eye  Section images heterozygote 100% (2 of 2)
Kidney  Section images heterozygote 100% (2 of 2)
Large intestine  Section images heterozygote 100% (2 of 2)
Lung  Section images heterozygote 100% (2 of 2)
Pancreas  Section images heterozygote 100% (2 of 2)
Pituitary gland  Section images heterozygote 100% (2 of 2)
Skin  Section images heterozygote 100% (2 of 2)
Small intestine  Section images heterozygote 100% (2 of 2)
Stomach  Section images heterozygote 100% (2 of 2)
Submandibular gland  Section images heterozygote 100% (2 of 2)
Testis  Section images heterozygote 50% (1 of 2)
Trachea  Section images heterozygote 100% (2 of 2)
Urinary bladder  Section images heterozygote 100% (2 of 2)
Adrenal gland N/A heterozygote 0.0% (0 of 2)
Aorta N/A heterozygote 0.0% (0 of 2)
Brain N/A heterozygote 0.0% (0 of 2)
Brainstem N/A heterozygote 0.0% (0 of 2)
Brown adipose tissue N/A heterozygote 0.0% (0 of 2)
Cartilage tissue N/A heterozygote 0.0% (0 of 2)
Cerebellum N/A heterozygote 0.0% (0 of 2)
Cerebral cortex N/A heterozygote 0.0% (0 of 2)
Heart N/A heterozygote 0.0% (0 of 2)
Hippocampus N/A heterozygote 0.0% (0 of 2)
Hypothalamus N/A heterozygote 0.0% (0 of 2)
Liver N/A heterozygote 0.0% (0 of 2)
Lower urinary tract N/A heterozygote Not available
Lymph node N/A heterozygote 0.0% (0 of 2)
Mammary gland N/A heterozygote 0.0% (0 of 2)
Midbrain N/A heterozygote 0.0% (0 of 2)
Olfactory lobe N/A heterozygote 0.0% (0 of 2)
Ovary N/A heterozygote 0.0% (0 of 2)
Oviduct N/A heterozygote 0.0% (0 of 2)
Peripheral nervous system N/A heterozygote 0.0% (0 of 2)
Peyer's patch N/A heterozygote Not available
Prostate gland N/A heterozygote Not available
Skeletal muscle N/A heterozygote 0.0% (0 of 2)
Spinal cord N/A heterozygote 0.0% (0 of 2)
Spleen N/A heterozygote 0.0% (0 of 2)
Striatum N/A heterozygote Not available
Thalamus N/A heterozygote 0.0% (0 of 2)
Thymus N/A heterozygote 0.0% (0 of 2)
Thyroid gland N/A heterozygote 0.0% (0 of 2)
Uterus N/A heterozygote 0.0% (0 of 2)
Vascular system N/A heterozygote 0.0% (0 of 2)
Vesicular gland N/A heterozygote Not available
White adipose tissue N/A heterozygote 0.0% (0 of 2)

An assay measuring the expression of lacZ shows the tissue where the gene is expressed.

Anatomy Images Zygosity Mutant Expr
Embryo N/A heterozygote 100% (1 of 1)
Embryo N/A homozygote 100% (1 of 1)
Brain N/A heterozygote 0.0% (0 of 1)
Brain N/A homozygote 100% (1 of 1)
Ear N/A heterozygote 0.0% (0 of 1)
Ear N/A homozygote 100% (1 of 1)
Eye N/A heterozygote 100% (1 of 1)
Eye N/A homozygote 100% (1 of 1)
Footplate N/A heterozygote 100% (1 of 1)
Footplate N/A homozygote 100% (1 of 1)
Forebrain N/A heterozygote 0.0% (0 of 1)
Forebrain N/A homozygote 0.0% (0 of 1)
Forelimb N/A heterozygote 100% (1 of 1)
Forelimb N/A homozygote 100% (1 of 1)
Handplate N/A heterozygote 100% (1 of 1)
Handplate N/A homozygote 100% (1 of 1)
Head N/A heterozygote 100% (1 of 1)
Head N/A homozygote 100% (1 of 1)
Heart N/A heterozygote 0.0% (0 of 1)
Heart N/A homozygote 0.0% (0 of 1)
Hindbrain N/A heterozygote 0.0% (0 of 1)
Hindbrain N/A homozygote 100% (1 of 1)
Hindlimb N/A heterozygote 100% (1 of 1)
Hindlimb N/A homozygote 100% (1 of 1)
Liver N/A heterozygote 0.0% (0 of 1)
Liver N/A homozygote 100% (1 of 1)
Lung N/A heterozygote 0.0% (0 of 1)
Lung N/A homozygote 100% (1 of 1)
Mandibular process N/A heterozygote 100% (1 of 1)
Mandibular process N/A homozygote 100% (1 of 1)
Maxillary process N/A heterozygote 100% (1 of 1)
Maxillary process N/A homozygote 100% (1 of 1)
Midbrain N/A heterozygote 0.0% (0 of 1)
Midbrain N/A homozygote 0.0% (0 of 1)
N/A Ambiguous
Nose N/A homozygote 100% (1 of 1)
Oral cavity N/A heterozygote 100% (1 of 1)
Oral cavity N/A homozygote 100% (1 of 1)
Skin N/A heterozygote 0.0% (0 of 1)
Skin N/A homozygote 0.0% (0 of 1)
Tail somite N/A heterozygote 0.0% (0 of 1)
Tail somite N/A homozygote 0.0% (0 of 1)
Tail N/A heterozygote 100% (1 of 1)
Tail N/A homozygote 100% (1 of 1)

Background staining occurs in wild type mice and embryos at an incidental rate.

Anatomy Background staining in controls (WT)
adrenal gland 0.0%
aorta 0.0%
brain 0.0%
brainstem 0.0%
brown adipose tissue 0.0%
cartilage tissue 0.0%
cerebellum 0.0%
cerebral cortex 0.0%
epididymis Unavailable
esophagus 0.0%
eye 0.0%
heart 0.0%
hippocampus 0.0%
hypothalamus 0.0%
kidney 0.0%
large intestine 0.0%
liver 0.0%
lower urinary tract 0.0%
lung 0.0%
lymph node 0.0%
mammary gland 0.0%
midbrain 0.0%
olfactory lobe 0.0%
ovary 0.0%
oviduct 0.0%
pancreas 0.0%
peripheral nervous system 0.0%
peyers patch 0.0%
pituitary gland 0.0%
prostate gland 0.0%
skeletal muscle 0.0%
skin 0.0%
small intestine 0.0%
spinal cord 0.0%
spleen 0.0%
stomach 0.0%
striatum 0.0%
submandibular gland 0.0%
testis 0.0%
thalamus 0.0%
thymus 0.0%
thyroid gland 0.0%
trachea 0.0%
urinary bladder
uterus 0.0%
vascular system 0.0%
vesicular gland Unavailable
white adipose tissue 0.0%

Background staining occurs in wild type mice and embryos at an incidental rate.

Background staining occurs in wild type embryos at a measurable rate.

Anatomy Background staining in controls(WT)
brain 0.0%
ear 0.0%
embryo 0.0%
eye 0.0%
footplate 0.0%
forebrain 0.0%
forelimb 0.0%
handplate 0.0%
head 0.0%
heart 0.0%
hindbrain 0.0%
hindlimb 0.0%
liver 0.0%
lung 0.0%
mandibular process 0.0%
maxillary process 0.0%
midbrain 0.0%
nose Ambiguous
oral cavity 0.0%
skin 0.0%
tail 0.0%
tail somite group 0.0%

Associated Images

Images submitted by IMPC centres for a selection of procedures. Each set of images is available to view in our image comparator.

Sleep Wake

Wake state (bmp file)

15 Images

Eye Morphology

Images Slit Lamp

2 Images

X-ray

XRay Images Whole Body Lateral Orientation

16 Images

Adult LacZ

LacZ Images Section

15 Images

X-ray

XRay Images Whole Body Dorso Ventral

16 Images

X-ray

XRay Images Skull Dorso Ventral Orientation

16 Images

X-ray

XRay Images Forepaw

16 Images

X-ray

XRay Images Skull Lateral Orientation

16 Images

Embryo LacZ

LacZ images wholemount

8 Images

Eye Morphology

Images Ophthalmoscopy

5 Images

MicroCT E18.5

Embryo reconstruction

5 Images

MicroCT E14.5-E15.5

Embryo reconstruction

8 Images

Gross Morphology Embryo E18.5

Images

2 Images

Auditory Brain Stem Response

Click-evoked + 6 to 30kHz tone waveforms (pdf format)

8 Images

Human diseases caused by Cgn mutations

The analysis uses data from IMPC, along with published data on other mouse mutants, in comparison to human disease reports in OMIM, Orphanet, and DECIPHER.

Phenotype comparisons summarize the similarity of mouse phenotypes with human disease phenotypes.

No human diseases associated to this gene by orthology or annotation.

The table below shows human diseases predicted to be associated to Cgn by phenotypic similarity.

Disease Similarity of
phenotypes
Matching phenotypes Source
Diffuse Palmoplantar Keratoderma-Acrocyanosis Syndrome
Acrocyanosis ORPHA:86918
Venular Insufficiency, Systemic
Cyanosis OMIM:192700
Sulfhemoglobinemia, Congenital
Cyanosis OMIM:185460
Methemoglobinemia, Beta Type
Cyanosis OMIM:617971
Methemoglobinemia, Alpha Type
Cyanosis OMIM:617973
Muscular Dystrophy-Dystroglycanopathy (Congenital With Brain And Eye Anomalies), Type A, 10
Neural tube defect OMIM:615041
Cardiomyopathy-Hypotonia-Lactic Acidosis Syndrome
Low-output congestive heart failure, Hypertrophic cardiomyopathy, Cyanosis ORPHA:91130
Bullous Dystrophy, Hereditary Macular Type
Acrocyanosis OMIM:302000
Congenital Heart Block
Cyanosis, First degree atrioventricular block, Gallop rhythm, Congestive heart failure, Atriovent... ORPHA:60041
Neural Tube Defects, Folate-Sensitive
Spinal dysraphism OMIM:601634
Perching Syndrome
Cyanosis OMIM:617055
Duodenal Ulcer, Hyperpepsinogenemic I
Duodenal ulcer OMIM:126850
Seizures, Benign Familial Infantile, 3
Cyanosis OMIM:607745
Cyanosis, Transient Neonatal
Jaundice, Cyanosis OMIM:613977
Isolated Right Ventricular Hypoplasia
Tricuspid regurgitation, Cyanosis, Abnormal atrioventricular conduction, Right ventricular failur... ORPHA:439
Seizures, Benign Familial Infantile, 1
Cyanosis OMIM:601764
Gastrocutaneous Syndrome
Peptic ulcer, Hiatus hernia OMIM:137270
Breath-Holding Spells
Cyanosis OMIM:607578
Cryofibrinogenemia, Familial Primary
Acrocyanosis OMIM:123540
Spina Bifida-Hypospadias Syndrome
Spina bifida, Spinal dysraphism ORPHA:3176
Chiari Malformation Type Ii
Cyanosis, Spina bifida, Myelomeningocele, Hydrocephalus, Cervical myelopathy OMIM:207950
Buerger Disease
Vasculitis, Acrocyanosis ORPHA:36258
Cardiac Valvular Dysplasia 2
Aortic regurgitation, Increased left ventricular end-diastolic volume, Tricuspid regurgitation, L... OMIM:620067
Colonic Atresia
Peptic ulcer, Colonic atresia, Duodenal stenosis ORPHA:1198
Tremor-Nystagmus-Duodenal Ulcer Syndrome
Duodenal ulcer ORPHA:3350
Neuralgic Amyotrophy
Acrocyanosis ORPHA:2901
Congenital Pulmonary Lymphangiectasia
Tricuspid regurgitation, Cyanosis, Congestive heart failure, Pulmonic stenosis, Pulmonary arteria... ORPHA:2414
Duodenal Ulcer Due To Antral G-Cell Hyperfunction
Duodenal ulcer OMIM:126840
Acquired Methemoglobinemia
Tachycardia, Cyanosis, Hypoxemia, Syncope, Palpitations, Arrhythmia ORPHA:464453
Infant Acute Respiratory Distress Syndrome
Tachycardia, Cyanosis, Cardiac arrest, Hypoxemia, Bradycardia, Hypotension ORPHA:70587
Nk-Cell Enteropathy
Colonic diverticula, Duodenal ulcer, Abnormal gastric mucosa morphology, Hematochezia, Gastric ul... ORPHA:263665
Atrial Septal Defect, Ostium Secundum Type
Bundle branch block, First degree atrioventricular block, Abnormal left ventricular function, Sup... ORPHA:99103
Pulmonary Arteriovenous Malformation
Cyanosis, Transient ischemic attack, Epistaxis, Myocardial infarction, Heart murmur, Telangiectas... ORPHA:2038
Phosphoserine Aminotransferase Deficiency
Cyanotic episode OMIM:610992
Atrial Septal Defect, Ostium Primum Type
Atrial flutter, Tricuspid regurgitation, Cyanosis, Abnormally loud pulmonic component of the seco... ORPHA:99106
Classic Glucose Transporter Type 1 Deficiency Syndrome
Cyanosis ORPHA:71277
Atrial Septal Defect, Coronary Sinus Type
Bundle branch block, Abnormally loud pulmonic component of the second heart sound, Cyanosis, Left... ORPHA:99104
Complete Atrioventricular Septal Defect
Abnormal EKG, Tachycardia, Cyanosis, Left-to-right shunt, Right ventricular failure, Third heart ... ORPHA:1329
Congenitally Uncorrected Transposition Of The Great Arteries
Tachycardia, Cyanosis, Cardiac shunt, Congestive heart failure, Left ventricular outflow tract ob... ORPHA:860
Obesity-Hypoventilation Syndrome
Cyanosis OMIM:257500
Mitochondrial Phosphate Carrier Deficiency
Hypertrophic cardiomyopathy, Cyanosis OMIM:610773
Benign Familial Infantile Epilepsy
Cyanosis ORPHA:306
Congenital Fibrinogen Deficiency
Tachycardia, Cyanosis, Bruising susceptibility, Internal hemorrhage, Subcutaneous hemorrhage ORPHA:335
Combined Oxidative Phosphorylation Defect Type 23
Wolff-Parkinson-White syndrome, Cyanosis, Congestive heart failure, Severely reduced left ventric... ORPHA:444013
Tricuspid Atresia
Cyanosis ORPHA:1209
Acquired Purpura Fulminans
Shock, Intracranial hemorrhage, Macular purpura, Acrocyanosis, Internal hemorrhage ORPHA:49566
Peripheral Motor Neuropathy-Dysautonomia Syndrome
Acrocyanosis ORPHA:2400
High Altitude Pulmonary Edema
Hypoxemia, Tachycardia, Cyanosis ORPHA:330012
Cleft Larynx, Posterior
Cyanosis OMIM:215800
Laryngeal Abductor Paralysis
Cyanosis OMIM:150260
Criss-Cross Heart
Cyanosis, Tricuspid stenosis, Pulmonic stenosis, Mitral stenosis, Supravalvular aortic stenosis ORPHA:1461
Hereditary Methemoglobinemia
Cyanosis ORPHA:621
Glycogen Storage Disease Of Heart, Lethal Congenital
Cyanosis, Prolonged QRS complex, Left axis deviation, Congestive heart failure, ST segment elevat... OMIM:261740
Interstitial Pneumonitis, Desquamative, Familial
Cyanosis OMIM:263000
Kallmann Syndrome-Heart Disease Syndrome
Aortic regurgitation, Cyanosis, Congestive heart failure, Dilated cardiomyopathy, Heart murmur, M... ORPHA:2326
Gastrocutaneous Syndrome
Peptic ulcer, Hiatus hernia ORPHA:2069
Asbestos Intoxication
Cyanosis, Right ventricular failure, Hypoxemia, Hepatojugular reflux, Oxygen desaturation on exer... ORPHA:2302
Phosphoserine Aminotransferase Deficiency, Infantile/Juvenile Form
Intrauterine growth retardation, Cyanotic episode ORPHA:284417
Restrictive Dermopathy 2
Intrauterine growth retardation, Cyanosis OMIM:619793
Tremor, Nystagmus, And Duodenal Ulcer
Duodenal ulcer OMIM:190310
Tetrasomy 5P
Cyanosis, Congestive heart failure, Hydrocephalus, Heart murmur, Pulmonary arterial hypertension ORPHA:3309
Laryngotracheal Angioma
Cyanosis ORPHA:137935
Hyperimmunoglobulinemia D With Periodic Fever
Gastrointestinal hemorrhage, Vasculitis, Erythema, Urticaria, Acrocyanosis, Purpura ORPHA:343
Microcephaly, Cerebellar Hypoplasia, And Cardiac Conduction Defect Syndrome
Acrocyanosis, Atrioventricular block, Bradycardia OMIM:614407
Hypoadrenocorticism, Familial
Cyanosis OMIM:240200
Pulmonary Capillary Hemangiomatosis
Cyanosis, Diffuse alveolar hemorrhage, Right ventricular failure, Hypoxemia, Elevated pulmonary a... ORPHA:199241
Benign Familial Neonatal Epilepsy
Circumoral cyanosis ORPHA:1949
Hsd10 Disease, Infantile Type
Hypertrophic cardiomyopathy, Cyanosis ORPHA:391428
Aortic Arch Interruption
Aortic regurgitation, Shock, Tricuspid regurgitation, Cyanosis, Blood pressure substantially high... ORPHA:2299
Methemoglobinemia Due To Deficiency Of Methemoglobin Reductase
Cyanosis OMIM:250800
Congenital Tricuspid Valve Dysplasia
Tricuspid regurgitation, Cyanosis, Hypoxemia, Intrauterine growth retardation, Systolic heart murmur ORPHA:555874
Carnitine-Acylcarnitine Translocase Deficiency
Cyanosis, Ventricular tachycardia, Cardiomyopathy, Hypotension, Arrhythmia ORPHA:159
Telangiectasia, Hereditary Hemorrhagic, Type 4
Conjunctival telangiectasia, Spontaneous, recurrent epistaxis, Cyanosis, Transient ischemic attac... OMIM:610655
Postsynaptic Congenital Myasthenic Syndromes
Cyanosis ORPHA:98913
Primary Pulmonary Hypoplasia
Hypoxemia, Intrauterine growth retardation, Cyanosis ORPHA:2257
Histiocytoid Cardiomyopathy
Wolff-Parkinson-White syndrome, Atrial flutter, Cyanosis, Tachycardia, Atrial fibrillation, Junct... ORPHA:137675
Gastrointestinal Ulceration, Recurrent, With Dysfunctional Platelets
Esophageal ulceration, Gastric ulcer, Duodenal ulcer OMIM:618372
Telangiectasia, Hereditary Hemorrhagic, Type 2
Conjunctival telangiectasia, Tongue telangiectasia, Palate telangiectasia, Fingerpad telangiectas... OMIM:600376
Fryns Microphthalmia Syndrome
Neural tube defect OMIM:600776
Double Outlet Right Ventricle
Tachycardia, Cyanosis, Heart murmur, Pulmonic stenosis ORPHA:3426
Eosinophilic Granulomatosis With Polyangiitis
Recurrent intrapulmonary hemorrhage, Cutis marmorata, Transient ischemic attack, Myocardial infar... ORPHA:183
Cryptogenic Organizing Pneumonia
Hypoxemia, Cyanosis ORPHA:1302
Meckel Syndrome 14
Occipital encephalocele, Tricuspid regurgitation, Cyanosis, Mitral regurgitation, Holoprosencephaly OMIM:619879
Chronic Pneumonitis Of Infancy
Hypoxemia, Cyanosis ORPHA:91359
Hereditary Bullous Dystrophy, Macular Type
Acrocyanosis, Heart murmur ORPHA:1867
Congenitally Corrected Transposition Of The Great Arteries
Wolff-Parkinson-White syndrome, First degree atrioventricular block, Heart block, Ventricular tac... ORPHA:216694
Acute Interstitial Pneumonia
Hypoxemia, Hypertension, Cyanosis ORPHA:79126
Telangiectasia, Hereditary Hemorrhagic, Type 1
Conjunctival telangiectasia, Tongue telangiectasia, Palate telangiectasia, High-output congestive... OMIM:187300
Eisenmenger Syndrome
Cyanosis, Tricuspid regurgitation, Left-to-right shunt, Atrial fibrillation, Right ventricular fa... ORPHA:97214
Fallot Complex-Intellectual Disability-Growth Delay Syndrome
Cyanosis, Pulmonic stenosis ORPHA:3304
Sepsis In Premature Infants
Tachycardia, Cyanosis, Jaundice, Bradycardia, Hypotension, Petechiae, Purpura ORPHA:90051
Ethylmalonic Encephalopathy
Acrocyanosis, Petechiae ORPHA:51188
Dravet Syndrome
Cyanotic episode ORPHA:33069
Aicardi-Goutieres Syndrome 1
Erythema, Vasculitis, Cardiomyopathy, Prolonged neonatal jaundice, Acrocyanosis, Petechiae, Purpura OMIM:225750
Methemoglobinemia And Ambiguous Genitalia
Cyanosis OMIM:250790
Laryngotracheoesophageal Cleft
Cyanosis ORPHA:2004
Encephalopathy, Ethylmalonic
Acrocyanosis, Petechiae OMIM:602473
Ethylene Glycol Poisoning
Prolonged QT interval, Shock, Tachycardia, Cyanosis, Atrial fibrillation, Congestive heart failur... ORPHA:31826
Deafness-Small Bowel Diverticulosis-Neuropathy Syndrome
Duodenal ulcer, Steatorrhea, Malabsorption ORPHA:3217
Absence Of The Pulmonary Artery
Abnormal EKG, Atrial flutter, Cyanosis, Tachycardia, Atrial fibrillation, Congestive heart failur... ORPHA:980
Pulmonary Alveolar Proteinosis, Acquired
Hypoxemia, Cyanosis OMIM:610910
Phosphoenolpyruvate Carboxykinase Deficiency, Cytosolic
Cyanosis OMIM:261680
Surfactant Metabolism Dysfunction, Pulmonary, 1
Pulmonary arterial hypertension, Cyanosis OMIM:265120
Craniorachischisis
Cervical spina bifida, Myelomeningocele, Anencephaly, Sirenomelia, Spinal dysraphism ORPHA:63260
Abnormal Origin Of Right Or Left Pulmonary Artery From The Aorta
Cyanosis, Left-to-right shunt, Congestive heart failure, Left ventricular outflow tract obstructi... ORPHA:99050
Hypocalciuric Hypercalcemia, Familial, Type Ii
Peptic ulcer OMIM:145981
Eosinophilic Fasciitis
Acrocyanosis ORPHA:3165
Alg3-Cdg
Cardiomyopathy, Neural tube defect ORPHA:79321
Blepharocheilodontic Syndrome 1
Neural tube defect OMIM:119580
Waardenburg Syndrome Type 3
Acrocyanosis ORPHA:896
Neurodevelopmental Disorder With Impaired Language And Ataxia And With Or Without Seizures
Cyanosis OMIM:619580
Choanal Atresia
Cyanosis ORPHA:137914
Autoimmune Pulmonary Alveolar Proteinosis
Hypoxemia, Cyanosis ORPHA:747
Double Outlet Left Ventricle
Cyanosis, Systolic heart murmur, Abnormal right ventricular function ORPHA:3427
Surfactant Metabolism Dysfunction, Pulmonary, 2
Hypoxemia, Pulmonary arterial hypertension, Cyanosis OMIM:610913
Severe Growth Deficiency-Strabismus-Extensive Dermal Melanocytosis-Intellectual Disability Syndrome
Cyanosis ORPHA:488627
Congenital Myasthenic Syndrome
Cyanosis ORPHA:590
Presynaptic Congenital Myasthenic Syndromes
Cyanosis ORPHA:98914
Structural Heart Defects And Renal Anomalies Syndrome
Cyanosis, Systolic heart murmur OMIM:617478
Hyperoxaluria, Primary, Type I
Cutis marmorata, Raynaud phenomenon, Arterial occlusion, Atrioventricular block, Intermittent cla... OMIM:259900
Zollinger-Ellison Syndrome
Gastrointestinal hemorrhage, Intestinal obstruction, Duodenal ulcer, Peptic ulcer, Hematochezia, ... ORPHA:913
Isolated Posterior Meningocele
Hydrocephalus, Meningocele, Lipomyelomeningocele, Neural tube defect, Occipital meningocele ORPHA:268810
Hutchinson-Gilford Progeria Syndrome
Aortic regurgitation, Prominent superficial blood vessels, Cyanosis, Mitral stenosis, Angina pect... ORPHA:740
Neuropathy, Hereditary Sensory And Autonomic, Type Iii
Hypertension, Orthostatic hypotension, Acrocyanosis, Tachycardia OMIM:223900
Primary Hyperoxaluria
Cutis marmorata, Heart block, Raynaud phenomenon, Arterial occlusion, Cardiomyopathy, Intermitten... ORPHA:416
Heterotaxy, Visceral, 1, X-Linked
Cyanosis, Aqueductal stenosis, Myelomeningocele, Hydrocephalus, Pulmonic stenosis, Mitral stenosis OMIM:306955
Dermatomyositis
Pericarditis, Telangiectasia of the skin, Myocardial infarction, Myocarditis, Erythema, Vasculiti... ORPHA:221
Pachydermoperiostosis
Gastrointestinal hemorrhage, Peptic ulcer, Malabsorption ORPHA:2796
Myasthenia Gravis
Raynaud phenomenon, Acrocyanosis ORPHA:589
Fucosidosis
Acrocyanosis, Vascular skin abnormality ORPHA:349
Pulmonary Alveolar Microlithiasis
Cyanosis, Right ventricular failure, Increased pulmonary vascular resistance, Hypoxemia, Oxygen d... ORPHA:60025
Cardiac Valvular Dysplasia 1
Tricuspid regurgitation, Cyanosis, Tricuspid stenosis, Valvular pulmonary stenosis, Mitral regurg... OMIM:212093
Multiple Endocrine Neoplasia, Type I
Zollinger-Ellison syndrome, Peptic ulcer, Esophagitis OMIM:131100
Familial Dysautonomia
Hypertension, Orthostatic hypotension, Acrocyanosis, Tachycardia ORPHA:1764
Surfactant Metabolism Dysfunction, Pulmonary, 3
Hypoxemia, Cyanosis OMIM:610921
Tarp Syndrome
Intrauterine growth retardation, Cyanosis ORPHA:2886
Hypocalciuric Hypercalcemia, Familial, Type Iii
Peptic ulcer OMIM:600740
Mitochondrial Complex I Deficiency, Nuclear Type 1
Hypertrophic cardiomyopathy, Cyanosis, Concentric hypertrophic cardiomyopathy OMIM:252010
Poems Syndrome
Pulmonary arterial hypertension, Acrocyanosis ORPHA:2905
Unilateral Polymicrogyria
Cyanosis, Epistaxis ORPHA:268943
Systemic Mastocytosis With Associated Hematologic Neoplasm
Peptic ulcer ORPHA:98849
Heterotaxy, Visceral, 7, Autosomal
Cyanosis OMIM:616749
Postinfectious Vasculitis
Cerebral vasculitis, Palpable purpura, Cutis marmorata, Raynaud phenomenon, Cardiomyopathy, Hyper... ORPHA:48435
Myasthenic Syndrome, Congenital, 21, Presynaptic
Cyanosis OMIM:617239
Truncus Arteriosus
Aortic regurgitation, Tachycardia, Cyanosis, Abnormal heart valve physiology, Pulmonic stenosis, ... ORPHA:3384
Congenital Tracheomalacia
Pulmonary arterial hypertension, Cyanosis ORPHA:95430
Classical Ehlers-Danlos Syndrome
Orthostatic hypotension, Prematurely aged appearance, Poor wound healing, Arterial rupture, Mitra... ORPHA:287
Esophageal Atresia
Cyanosis ORPHA:1199
Plasminogen Deficiency, Type I
Duodenal ulcer OMIM:217090
Multiple Endocrine Neoplasia Type 4
Zollinger-Ellison syndrome, Peptic ulcer, Esophagitis ORPHA:276152
Multiple Endocrine Neoplasia Type 1
Duodenal ulcer, Peptic ulcer, Hematemesis, Melena, Zollinger-Ellison syndrome, Gastroesophageal r... ORPHA:652
Aicardi-Goutières Syndrome
Cutis marmorata, Raynaud phenomenon, Prolonged neonatal jaundice, Hypertrophic cardiomyopathy, Ac... ORPHA:51
Encephalopathy, Acute, Infection-Induced, Susceptibility To, 9
Cyanosis OMIM:618426
Hyperparathyroidism-Jaw Tumor Syndrome
Peptic ulcer, Dysphagia ORPHA:99880
Parathyroid Carcinoma
Peptic ulcer, Dysphagia ORPHA:143
Pitt-Hopkins Syndrome
Acrocyanosis ORPHA:2896
Gaisböck Syndrome
Peptic ulcer ORPHA:90041
Generalized Arterial Calcification Of Infancy
Cyanosis, Transient ischemic attack, Retinal hemorrhage, Hypertension, Weak pulse, Left ventricul... ORPHA:51608
Menke-Hennekam Syndrome 2
Duodenal ulcer OMIM:618333
Familial Hypocalciuric Hypercalcemia
Peptic ulcer ORPHA:405
Williams Syndrome
Colonic diverticula, Peptic ulcer, Malabsorption, Abnormal gastric mucosa morphology, Rectal prol... ORPHA:904
Rapid-Onset Childhood Obesity-Hypothalamic Dysfunction-Hypoventilation-Autonomic Dysregulation Syndrome
Cyanosis ORPHA:293987
Congenital Tracheal Stenosis
Cyanosis ORPHA:141127
Goodpasture Syndrome
Cyanosis, Pulmonary hemorrhage OMIM:233450
Congenital Total Pulmonary Venous Return Anomaly
Tachycardia, Tricuspid regurgitation, Cyanosis, Right ventricular failure, Low-output congestive ... ORPHA:99125
Hypoplasminogenemia
Duodenal ulcer ORPHA:722
Coffin-Lowry Syndrome
Mitral regurgitation, Acrocyanosis, Cutis marmorata OMIM:303600
Immunodeficiency 82 With Systemic Inflammation
Villous atrophy, Duodenal ulcer, Gastritis, Colitis, Anoperineal fistula, Crohn's disease OMIM:619381
Spondyloocular Syndrome
Duodenal ulcer OMIM:605822
Hypermobile Ehlers-Danlos Syndrome
Umbilical hernia, Arrhythmia, Acrocyanosis ORPHA:285
Coffin-Siris Syndrome 1
Duodenal ulcer, Intestinal malrotation, Cleft palate, Gastric ulcer, High palate, Intussusception OMIM:135900
Semilobar Holoprosencephaly
Abnormal heart rate variability, Neural tube defect, Hydrocephalus ORPHA:220386
Alobar Holoprosencephaly
Abnormal heart rate variability, Neural tube defect, Hydrocephalus ORPHA:93925
Midline Interhemispheric Variant Of Holoprosencephaly
Abnormal heart rate variability, Neural tube defect, Hydrocephalus ORPHA:93926
Lobar Holoprosencephaly
Abnormal heart rate variability, Neural tube defect, Hydrocephalus ORPHA:93924
Schinzel-Giedion Syndrome
Umbilical hernia, Neural tube defect ORPHA:798

Histopathology

Summary table of phenotypes displayed during the Histopathology procedure which are considered significant. Full histopathology data table, including submitted images, can be accessed by clicking any row in this table.

There is no histopathology data for Cgn

IMPC related publications

The table below lists publications which used either products generated by the IMPC or data produced by the phenotyping efforts of the IMPC. These publications have also been associated to Cgn.

There are 2 publications which use IMPC produced mice or data.

Title Journal IMPC Allele PubMed ID
A Genome-Wide Screen in Mice To Identify Cell-Extrinsic Regulators of Pulmonary Metastatic Colonisation. G3 (Bethesda, Md.) (June 2020) Igh-6tm1Cgn PMC7263671
Genome wide in vivo mouse screen data from studies to assess host regulation of metastatic colonisation. Scientific data (September 2017) Ighmtm1Cgn PMC5827107

Order Mouse and ES Cells

All available products are supplied via our member's centres or partnerships. When ordering a product from the IMPC you will be redirected to one of their websites or prompted to start an email.

MGI Allele Allele Type Produced
Cgntm1e(KOMP)Wtsi Targeted, non-conditional allele ES Cells
Cgntm1b(KOMP)Wtsi Reporter-tagged deletion allele (with selection cassette) Mice
Cgntm1a(KOMP)Wtsi KO first allele (reporter-tagged insertion with conditional potential) Mice, Targeting vectors, ES Cells

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