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Gene: Chchd1 MGI:1913371

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Gene Summary

Name:
coiled-coil-helix-coiled-coil-helix domain containing 1
Synonyms:
1110001O19Rik,  2400010G13Rik

Order Alleles

IMPC Phenotype Summary

Significant
Not Significant
Not tested

View all our phenotype data below

Phenotypes

The IMPC applies a panel of phenotyping screens to characterise single-gene knockout mice by comparison to wild types. Click on the different tabs to visualise significant phenotypes identified by the IMPC, as well as all data that was measured.

Phenotype System Allele Zyg Sex Life Stage P Value
pallor Chchd1tm1.1(KOMP)Vlcg HOM E12.5 0.00
abnormal neural tube closure Chchd1tm1.1(KOMP)Vlcg HOM E9.5 0.00
abnormal embryo size Chchd1tm1.1(KOMP)Vlcg HOM E12.5 0.00
abnormal embryo size Chchd1tm1.1(KOMP)Vlcg HOM E9.5 0.00
abnormal hindbrain development Chchd1tm1.1(KOMP)Vlcg HOM E9.5 0.00
abnormal midbrain development Chchd1tm1.1(KOMP)Vlcg HOM E9.5 0.00
embryonic growth retardation Chchd1tm1.1(KOMP)Vlcg HOM E9.5 0.00
abnormal forebrain development Chchd1tm1.1(KOMP)Vlcg HOM E9.5 0.00
pale yolk sac Chchd1tm1.1(KOMP)Vlcg HOM E12.5 0.00
preweaning lethality, complete penetrance Chchd1tm1.1(KOMP)Vlcg HOM   Early adult 0.00

Download data as:  TSV  XLS

Select physiological systems to view:
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Viewing: all phenotypes

lacZ Expression

No Adult expression data was found for this gene.

An assay measuring the expression of lacZ shows the tissue where the gene is expressed.

Anatomy Images Zygosity Mutant Expr
Axial skeleton N/A heterozygote 0.0% (0 of 2)
Brain N/A heterozygote 100% (2 of 2)
Central nervous system ganglion N/A heterozygote 0.0% (0 of 2)
Ear N/A heterozygote 0.0% (0 of 2)
Embryo N/A heterozygote 100% (2 of 2)
Eye N/A heterozygote 100% (2 of 2)
Footplate N/A heterozygote 0.0% (0 of 2)
Forebrain N/A heterozygote 100% (2 of 2)
Forelimb N/A heterozygote 0.0% (0 of 2)
Gut N/A heterozygote 100% (2 of 2)
Handplate N/A heterozygote 0.0% (0 of 2)
Head N/A heterozygote 100% (2 of 2)
Heart N/A heterozygote 100% (2 of 2)
Hindbrain N/A heterozygote 100% (2 of 2)
Hindlimb N/A heterozygote 0.0% (0 of 2)
Liver N/A heterozygote 100% (2 of 2)
Lung N/A heterozygote 0.0% (0 of 2)
Mandibular process N/A heterozygote 0.0% (0 of 2)
Maxillary process N/A heterozygote 0.0% (0 of 2)
Midbrain N/A heterozygote 100% (2 of 2)
Nose N/A heterozygote 0.0% (0 of 2)
Oral cavity N/A heterozygote 0.0% (0 of 2)
Skeleton N/A heterozygote 0.0% (0 of 2)
Skin N/A heterozygote 0.0% (0 of 2)
Spinal cord N/A heterozygote 100% (2 of 2)
Tail somite N/A heterozygote 0.0% (0 of 2)
Tail N/A heterozygote 0.0% (0 of 2)
Trachea N/A heterozygote 0.0% (0 of 2)
Urinary system N/A heterozygote 100% (2 of 2)

Background staining occurs in wild type mice and embryos at an incidental rate.

Anatomy Background staining in controls (WT)

Background staining occurs in wild type mice and embryos at an incidental rate.

Background staining occurs in wild type embryos at a measurable rate.

Anatomy Background staining in controls(WT)
axial skeleton Ambiguous
brain 0.0%
central nervous system ganglion Ambiguous
ear 0.0%
embryo 0.0%
eye 0.0%
footplate 0.0%
forebrain 0.0%
forelimb 0.0%
gut Ambiguous
handplate 0.0%
head 0.0%
heart 0.0%
hindbrain 0.0%
hindlimb 0.0%
liver 0.0%
lung 0.0%
mandibular process 0.0%
maxillary process 0.0%
midbrain 0.0%
nose Ambiguous
oral cavity 0.0%
skeleton Ambiguous
skin 0.0%
spinal cord Ambiguous
tail 0.0%
tail somite group 0.0%
trachea Ambiguous
urinary system Ambiguous

Associated Images

Images submitted by IMPC centres for a selection of procedures. Each set of images is available to view in our image comparator.

X-ray

XRay Images Whole Body Dorso Ventral

10 Images

View images
Embryo LacZ

LacZ images wholemount

8 Images

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Interactive Embryo Viewer Interactive Embryo Viewer
OPT E9.5

Embryo reconstruction

8 Images

View images
Gross Pathology and Tissue Collection

Images

8 Images

View images
Eye Morphology

Images Ophthalmoscopy

2 Images

View images

Human diseases caused by Chchd1 mutations

The analysis uses data from IMPC, along with published data on other mouse mutants, in comparison to human disease reports in OMIM, Orphanet, and DECIPHER.

Phenotype comparisons summarize the similarity of mouse phenotypes with human disease phenotypes.

No human diseases associated to this gene by orthology or annotation.

The table below shows human diseases predicted to be associated to Chchd1 by phenotypic similarity.

Disease Similarity of
phenotypes		 Matching phenotypes Source
Muscular Dystrophy-Dystroglycanopathy (Congenital With Brain And Eye Anomalies), Type A, 10
Neural tube defect OMIM:615041
Neural Tube Defects, Folate-Sensitive
Spinal dysraphism OMIM:601634
Myelopathy, Htlv-1-Associated
Myelopathy OMIM:159580
Spina Bifida-Hypospadias Syndrome
Spina bifida, Spinal dysraphism ORPHA:3176
Hereditary Persistence Of Fetal Hemoglobin-Beta-Thalassemia Syndrome
Pallor ORPHA:46532
Methylmalonic Acidemia With Homocystinuria, Type Cbld
Pallor ORPHA:79283
Peripheral Cone Dystrophy
Pallor OMIM:609021
Cone-Rod Dystrophy 11
Pallor OMIM:610381
Hb Bart'S Hydrops Fetalis
Hydrocephalus, Pallor ORPHA:163596
Osteoporosis-Oculocutaneous Hypopigmentation Syndrome
Short stature, Pallor ORPHA:2786
Aplasia Cutis Congenita
Skin ulcer, Spinal dysraphism ORPHA:1114
Anencephaly 1
Anencephaly, Spina bifida OMIM:206500
Optic Atrophy 1
Pallor OMIM:165500
Dermatitis, Atopic
Dry skin, Pallor, Facial erythema OMIM:603165
Acute Peripheral Arterial Occlusion
Pallor ORPHA:90064
Benign Paroxysmal Torticollis Of Infancy
Pallor ORPHA:71518
Breath-Holding Spells
Pallor OMIM:607578
Fryns Microphthalmia Syndrome
Neural tube defect OMIM:600776
Leber Congenital Amaurosis 14
Pallor OMIM:613341
Myopathy, Lactic Acidosis, And Sideroblastic Anemia 2
Growth delay, Pallor OMIM:613561
Acute Myelomonocytic Leukemia
Pallor ORPHA:517
Optic Atrophy 7 With Or Without Auditory Neuropathy
Pallor OMIM:612989
Hemoglobin D Disease
Pallor ORPHA:90039
Aprosencephaly Syndrome
Aprosencephaly, Anencephaly OMIM:207770
Primary Lateral Sclerosis, Juvenile
Pallor OMIM:606353
Familial Focal Epilepsy With Variable Foci
Pallor ORPHA:98820
X-Linked Sideroblastic Anemia
Pallor ORPHA:75563
Anemia, Congenital Dyserythropoietic, Type Ib
Growth delay, Short stature, Pallor OMIM:615631
Cyclic Vomiting Syndrome
Growth delay, Pallor OMIM:500007
Thiamine-Responsive Megaloblastic Anemia Syndrome
Short stature, Pallor ORPHA:49827
Non-Insulinoma Pancreatogenous Hypoglycemia Syndrome
Pallor ORPHA:276608
Congenital Heart Block
Intrauterine growth retardation, Pallor ORPHA:60041
Spontaneous Periodic Hypothermia
Pallor ORPHA:29822
Aminopterin/Methotrexate Embryofetopathy
Encephalocele, Short stature, Hydrocephalus, Meningocele, Anencephaly, Spinal dysraphism, Holopro... ORPHA:1908
Craniorachischisis
Cervical spina bifida, Myelomeningocele, Anencephaly, Sirenomelia, Spinal dysraphism ORPHA:63260
Retinitis Pigmentosa 51
Pallor OMIM:613464
Hyperinsulinism Due To Ucp2 Deficiency
Pallor ORPHA:276556
Autosomal Dominant Hyperinsulinism Due To Sur1 Deficiency
Pallor ORPHA:276575
Evans Syndrome
Pallor, Petechiae ORPHA:1959
Autosomal Dominant Hyperinsulinism Due To Kir6.2 Deficiency
Pallor ORPHA:276580
Hyperinsulinism Due To Hnf1A Deficiency
Pallor ORPHA:324575
Renal Tubular Acidosis, Distal, 4, With Hemolytic Anemia
Short stature, Pallor OMIM:611590
Blepharocheilodontic Syndrome 1
Neural tube defect OMIM:119580
Isolated Posterior Meningocele
Hydrocephalus, Meningocele, Lipomyelomeningocele, Neural tube defect, Occipital meningocele ORPHA:268810
Pyruvate Kinase Deficiency Of Red Cells
Intrauterine growth retardation, Pallor OMIM:266200
Fanconi Anemia, Complementation Group I
Intrauterine growth retardation, Short stature, Pallor OMIM:609053
Myopathic Ehlers-Danlos Syndrome
Pallor ORPHA:536516
Beta-Thalassemia
Pallor, Skin ulcer ORPHA:848
Anemia, Hypochromic Microcytic, With Iron Overload 2
Growth delay, Pallor OMIM:615234
Leishmaniasis
Pallor, Skin ulcer ORPHA:507
Myelofibrosis
Pallor, Purpura OMIM:254450
Myopathy, Lactic Acidosis, And Sideroblastic Anemia 1
Growth delay, Pallor, Delayed puberty OMIM:600462
Irida Syndrome
Pallor ORPHA:209981
Dravet Syndrome
Pallor ORPHA:33069
Primary Myelofibrosis
Ecchymosis, Pallor, Petechiae, Purpura ORPHA:824
Non-Functioning Paraganglioma
Pallor ORPHA:94080
Kcnq2-Related Epileptic Encephalopathy
Pallor, Facial erythema ORPHA:439218
Megaloblastic Anemia Due To Dihydrofolate Reductase Deficiency
Pallor OMIM:613839
Drug-Induced Autoimmune Hemolytic Anemia
Pallor ORPHA:90037
Cold Agglutinin Disease
Pallor ORPHA:56425
Deafness-Lymphedema-Leukemia Syndrome
Pallor ORPHA:3226
Anemia, Sideroblastic, 1
Anemic pallor OMIM:300751
Retinitis Pigmentosa 75
Pallor OMIM:617023
Acquired Idiopathic Sideroblastic Anemia
Pallor ORPHA:75564
3-Hydroxy-3-Methylglutaryl-Coa Lyase Deficiency
Pallor OMIM:246450
Mixed-Type Autoimmune Hemolytic Anemia
Pallor ORPHA:90036
Congenital Dyserythropoietic Anemia Type Iii
Short stature, Pallor ORPHA:98870
Alg3-Cdg
Neural tube defect ORPHA:79321
6-Pyruvoyl-Tetrahydropterin Synthase Deficiency
Pallor ORPHA:13
Myopathy, Mitochondrial, And Ataxia
Growth delay, Short stature, Pallor OMIM:617675
Rheumatic Fever
Erythema, Pallor ORPHA:3099
Idiopathic Pulmonary Hemosiderosis
Pallor ORPHA:99931
Congenital Hyperinsulinism Due To Hnf4A Deficiency
Pallor ORPHA:263455
Cone-Rod Dystrophy 8
Pallor OMIM:605549
Elliptocytosis 1
Pallor OMIM:611804
Tay-Sachs Disease
Pallor OMIM:272800
American Trypanosomiasis
Pallor ORPHA:3386
Hereditary Spherocytosis
Growth delay, Pallor, Skin ulcer ORPHA:822
Autoimmune Hemolytic Anemia, Warm Type
Pallor ORPHA:90033
Severe Congenital Hypochromic Anemia With Ringed Sideroblasts
Growth delay, Pallor ORPHA:300298
Dominant Beta-Thalassemia
Growth delay, Pallor, Skin ulcer, Delayed puberty ORPHA:231226
Senior-Loken Syndrome 8
Pallor OMIM:616307
Plummer-Vinson Syndrome
Pallor ORPHA:54028
Sacral Defect With Anterior Meningocele
Myeloschisis, Myelomeningocele, Meningocele, Hydrocephalus, Dermal sinus tract OMIM:600145
Childhood Absence Epilepsy
Pallor ORPHA:64280
Beta-Thalassemia Intermedia
Pallor, Skin ulcer ORPHA:231222
Letterer-Siwe Disease
Pallor OMIM:246400
Iniencephaly
Encephalocele, Rhizomelia, Spina bifida, Myelomeningocele, Hydrocephalus, Anencephaly, Spinal dys... ORPHA:63259
Histiocytoid Cardiomyopathy
Hydrocephalus, Pallor ORPHA:137675
Autosomal Recessive Malignant Osteopetrosis
Growth delay, Hydrocephalus, Pallor ORPHA:667
Sepsis In Premature Infants
Pallor, Petechiae, Purpura ORPHA:90051
Hereditary Folate Malabsorption
Pallor ORPHA:90045
Fructose-1,6-Bisphosphatase Deficiency
Pallor ORPHA:348
Diamond-Blackfan Anemia 1
Intrauterine growth retardation, Spina bifida occulta, Short stature, Pallor OMIM:105650
Sporadic Pheochromocytoma/Secreting Paraganglioma
Pallor ORPHA:276621
Beta-Thalassemia Major
Growth delay, Pallor, Skin ulcer, Delayed puberty ORPHA:231214
Beta-Ketothiolase Deficiency
Pallor ORPHA:134
Waldenström Macroglobulinemia
Pallor, Purpura ORPHA:33226
Severe Combined Immunodeficiency Due To Complete Rag1/2 Deficiency
Pallor ORPHA:331206
Non-Functioning Pituitary Adenoma
Pallor ORPHA:91349
Prolactinoma
Pallor, Delayed puberty ORPHA:2965
Imerslund-Gräsbeck Syndrome
Pallor ORPHA:35858
Fanconi Anemia, Complementation Group D2
Hydrocephalus, Anemic pallor, Short stature OMIM:227646
Generalized Juvenile Polyposis/Juvenile Polyposis Coli
Growth delay, Anemic pallor ORPHA:329971
Dehydrated Hereditary Stomatocytosis 1 With Or Without Pseudohyperkalemia And/Or Perinatal Edema
Pallor OMIM:194380
Adenohypophysitis
Pallor ORPHA:95512
Aregenerative Anemia
Pallor ORPHA:101096
3-Hydroxy-3-Methylglutaric Aciduria
Pallor ORPHA:20
Incontinentia Pigmenti
Erythema, Short stature, Pallor OMIM:308300
Panhypophysitis
Pallor ORPHA:95513
Anemia, Nonspherocytic Hemolytic, Due To G6Pd Deficiency
Pallor OMIM:300908
Sheehan Syndrome
Dry skin, Pallor ORPHA:91355
Pituitary Apoplexy
Pallor ORPHA:95613
Retinitis Pigmentosa And Erythrocytic Microcytosis
Pallor OMIM:616959
Hereditary Pheochromocytoma-Paraganglioma
Pallor ORPHA:29072
Systemic Mastocytosis With Associated Hematologic Neoplasm
Pallor ORPHA:98849
Fanconi Anemia, Complementation Group C
Intrauterine growth retardation, Anemic pallor, Short stature OMIM:227645
Refractory Anemia With Excess Blasts
Anemic pallor ORPHA:86839
Fumarase Deficiency
Pallor OMIM:606812
Muscular Dystrophy-Dystroglycanopathy (Congenital With Brain And Eye Anomalies), Type A, 3
Hydrocephalus, Pallor OMIM:253280
Alternating Hemiplegia Of Childhood
Pallor ORPHA:2131
Aprosencephaly And Cerebellar Dysgenesis
Aprosencephaly OMIM:601374
Pearson Marrow-Pancreas Syndrome
Erythema, Pallor OMIM:557000
Esophageal Atresia
Growth delay, Pallor ORPHA:1199
Fanconi Anemia, Complementation Group E
Anemic pallor, Short stature OMIM:600901
Fanconi Anemia, Complementation Group A
Anemic pallor, Short stature OMIM:227650
Degcags Syndrome
Intrauterine growth retardation, Pallor OMIM:619488
Tsh-Secreting Pituitary Adenoma
Pallor, Delayed puberty ORPHA:91347
Idiopathic Hypereosinophilic Syndrome
Pallor ORPHA:3260
Diamond-Blackfan Anemia
Growth delay, Short stature, Pallor ORPHA:124
Infection-Related Hemolytic Uremic Syndrome
Pallor ORPHA:544482
Multiple Endocrine Neoplasia Type 2
Pallor ORPHA:653
Von Hippel-Lindau Disease
Pallor ORPHA:892
Semilobar Holoprosencephaly
Growth delay, Neural tube defect, Hydrocephalus, Short stature ORPHA:220386
Alobar Holoprosencephaly
Growth delay, Neural tube defect, Hydrocephalus, Short stature ORPHA:93925
Midline Interhemispheric Variant Of Holoprosencephaly
Growth delay, Neural tube defect, Hydrocephalus, Short stature ORPHA:93926
Lobar Holoprosencephaly
Growth delay, Neural tube defect, Hydrocephalus, Short stature ORPHA:93924
Schinzel-Giedion Syndrome
Umbilical hernia, Neural tube defect ORPHA:798
Goodpasture Syndrome
Pallor OMIM:233450
Congenital Total Pulmonary Venous Return Anomaly
Pallor ORPHA:99125

Histopathology

Summary table of phenotypes displayed during the Histopathology procedure which are considered significant. Full histopathology data table, including submitted images, can be accessed by clicking any row in this table.

There is no histopathology data for Chchd1

IMPC related publications

The table below lists publications which used either products generated by the IMPC or data produced by the phenotyping efforts of the IMPC. These publications have also been associated to Chchd1.

No publications found that use IMPC mice or data for Chchd1.

Order Mouse and ES Cells

All available products are supplied via our member's centres or partnerships. When ordering a product from the IMPC you will be redirected to one of their websites or prompted to start an email.

MGI Allele Allele Type Produced
Chchd1tm1.1(KOMP)Vlcg Reporter-tagged deletion allele (post Cre, with no selection cassette) Mice, Tissue
Chchd1tm214240(L1L2_Bact_P) Reporter-tagged deletion allele (with selection cassette) Targeting vectors
Chchd1tm1(KOMP)Vlcg Reporter-tagged deletion allele (with selection cassette) Mice, ES Cells

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